type=$2
fi
+if [ -z "$3" ]; then
+ trg="video"
+else
+ type="video.*"
+fi
+
if [ "$type" != "disp" ]; then
-for i in $1/video*; do
+for i in $1/$trg; do
+ if [ -f $i/stdvis ]; then
+ echo "$i already visualized ..."
+ continue
+ else
+ touch $i/stdvis
+ fi
# first unit cell in each direction without rotation
if [ "$type" = "default" -o "$type" = "1" ]; then
-nll -0.20 -0.20 -0.50 -fur 1.20 1.20 1.20 \
-b 0.0 0.0 0.0 1.0 1.0 1.0 \
-c 0.8 -1.7 0.9 -L 0.5 -1.0 0.5 \
- -r 0.6
+ -r 0.6 -A 1 217 1.9
+fi
+
+# first unit cell in each direction without rotation displaying mirrored atoms
+if [ "$type" = "1m" ]; then
+echo "type: 1 no rotation, mirrored"
+./visualize -w 640 -h 480 -d $i \
+ -nll -0.20 -0.20 -0.20 -fur 1.20 1.20 1.20 \
+ -b 0.0 0.0 0.0 1.0 1.0 1.0 \
+ -c 0.8 -1.7 0.9 -L 0.5 -1.0 0.5 \
+ -r 0.6 -m 3.0 0.0 0.0 0.0 3.0 0.0 0.0 0.0 3.0 \
+ -A 1 217 2.6
+fi
+
+# first unit cell in each direction without rotation displaying mirrored atoms
+if [ "$type" = "1m2" ]; then
+echo "type: 1 no rotation, mirrored, displaying bonds of the 2 C atoms"
+./visualize -w 640 -h 480 -d $i \
+ -nll -0.20 -0.20 -0.20 -fur 1.20 1.20 1.20 \
+ -b 0.0 0.0 0.0 1.0 1.0 1.0 \
+ -c 0.8 -1.7 0.9 -L 0.5 -1.0 0.5 \
+ -r 0.6 -m 3.0 0.0 0.0 0.0 3.0 0.0 0.0 0.0 3.0 \
+ -A 2 217 218 2.6
fi
# three unit cells in each direction without rotation
#-b 0.0 0.0 0.0 0.0 0.0 1.0 \
fi
-# first unit cell displaying mirrored atoms
-if [ "$type" = "1m" ]; then
-echo "type: 1 no rotation, mirrored"
+# first unit cell rotated by 45 degrees displaying mirrored atoms
+if [ "$type" = "1rm" ]; then
+echo "type: 1 rotated, mirrored"
./visualize -w 640 -h 480 -d $i \
-nll -0.20 -0.20 -0.50 -fur 1.20 1.20 1.20 \
-b 0.0 0.0 0.0 1.0 1.0 1.0 \
-c 0.8 -1.7 0.9 -L 0.5 -1.0 0.5 \
- -r 0.6 -m 2.0 -2.0 0.0 2.0 2.0 0.0 0.0 0.0 3.0
+ -r 0.6 -m 2.0 -2.0 0.0 2.0 2.0 0.0 0.0 0.0 3.0 \
+ -A 1 193 1.9
fi
-# three unit cells in each direction displaying mirrored atoms
-if [ "$type" = "3m" ]; then
-echo "type: 3 no rotation, mirrored"
+# three unit cells (rotated) in each direction displaying mirrored atoms
+if [ "$type" = "3rm" ]; then
+echo "type: 3 roted, mirrored"
./visualize -w 640 -h 480 -d $i \
-nll -0.20 -0.20 -0.20 -fur 3.20 3.20 3.20 \
-b 0.0 0.0 0.0 3.0 3.0 3.0 \