-# default configuration for a molecular dynamics run
-
#
-# molecular dynamic variables
+# mdrun configuration file
#
-# delta t in fs
-DELTA_T 1.0
+## potential ##
-# temperature in kelvin
-TEMP 298.0
+potential albe 14 6
+cutoff 2.96
+nnd 2.351
-# t/p control
-BER_THERMO 1
-BER_BARO 0
+## integration algorithm ##
-#
-# lattice & atoms
-#
+intalgo verlet
+timestep 1.0
-# lattice/atom type
-L_TYPE DIAMOND Si C
+## simulation volume ##
-# lattice constant in angstrom
-L_CONSTANT 4.359
+volume 48.861 48.861 48.861
+pbc 1 1 1
-# lattice offset in lattice constants
-L_OFFSET 0.125
+## temperature / pressure ##
-# fixed atoms
-FX 0 0
-FY 0 0
-FZ 0 0
+temperature 723
+pressure 0.0
-# atoms coupled to heat bath
-HX 0 0
-HY 0 0
-HZ 0 0
+## initial lattice ##
-#
-# simulation cell
-#
+lattice diamond
+#lattice zincblende
+element1 14
+element2 6
+fill lc 9 9 9 5.429
+
+## atom attributes ##
+
+aattr t h123
+
+## initial simulation run ##
+
+prerun 100
+avgskip 0
+
+## system attributes, eg ensemble ctrl, equi ctrl, relaxation steps ##
+
+sattr pctrl 100.0 tctrl 100.0 prelax 1.0 trelax 1.0 rsteps 100 avgrst 1
+
+## more stages ##
+
+stage ins_atoms 10 1 14 0 vh123 rand -5.5 -5.5 -5.5 5.5 5.5 5.5 1.5
+stage ins_atoms 1 1 6 1 vh123 rand -2.715 -2.715 -2.715 2.715 2.715 2.715 1.5
+stage continue 10000
+#stage anneal 723 -1.0
-# size in lattice constants
-LC_COUNT_X 10
-LC_COUNT_Y 10
-LC_COUNT_Z 10
+## report / log / visualization / save files ##
-# periodic boundary conditions
-PER_BOUND_X 1
-PER_BOUND_Y 1
-PER_BOUND_Z 1
+elog 10
+tlog 10
+plog 10
+vlog 10
+save 100
+visualize 100