+ -nll -0.20 -0.20 -0.20 -fur 1.20 1.20 1.20 \
+ -b 0.0 0.0 0.0 1.0 1.0 1.0 \
+ -c 0.3 -1.7 0.9 -L 0.5 -1.0 0.5 \
+ -r 0.6 -m 3.0 0.0 0.0 0.0 3.0 0.0 0.0 0.0 3.0 \
+ -A 1 216 2.6
+ #-A 1 217 2.6
+ #-c 0.8 -1.7 0.9 -L 0.5 -1.0 0.5 \
+fi
+
+# defect combination view 1
+if [ "$type" = "dc1" ]; then
+echo "type: defect combination 1, mirrored"
+./visualize -w 640 -h 480 -d $i \
+ -nll -0.20 -0.20 -0.80 -fur 1.20 1.20 1.20 \
+ -b 0.0 0.0 0.0 1.0 1.0 1.0 \
+ -c 0.3 -1.7 0.9 -L 0.5 -1.0 0.5 \
+ -r 0.6 -m 3.0 0.0 0.0 0.0 3.0 0.0 0.0 0.0 3.0 \
+ -A 2 217 218 2.6
+fi
+
+# first unit cell in each direction without rotation displaying mirrored atoms
+if [ "$type" = "x1y1z13" ]; then
+echo "type: x1y1z13, mirrored"
+./visualize -w 640 -h 480 -d $i \
+ -nll -0.20 -0.20 -1.20 -fur 1.20 1.20 1.20 \
+ -b 0.0 0.0 0.0 1.0 1.0 1.0 \
+ -c 0.3 -1.7 0.4 -L 0.5 -1.0 0 \
+ -r 0.6 -m 3.0 0.0 0.0 0.0 3.0 0.0 0.0 0.0 3.0 \
+ -A 1 217 2.6
+ #-A 2 109 217 2.6
+fi
+
+# first unit cell in each direction without rotation displaying mirrored atoms
+if [ "$type" = "1m2" ]; then
+echo "type: 1 no rotation, mirrored, displaying bonds of the 2 C atoms"
+./visualize -w 640 -h 480 -d $i \
+ -nll -0.20 -0.20 -0.20 -fur 1.20 1.20 1.20 \
+ -b 0.0 0.0 0.0 1.0 1.0 1.0 \
+ -c 0.8 -1.7 0.9 -L 0.5 -1.0 0.5 \
+ -r 0.6 -m 3.0 0.0 0.0 0.0 3.0 0.0 0.0 0.0 3.0 \
+ -A 2 217 218 2.6
+fi
+
+if [ "$type" = "1m2dv" ]; then
+echo "type: 1 no rotation, mirrored, displaying bonds of db and vac"
+./visualize -w 640 -h 480 -d $i \
+ -nll -0.20 -0.20 -0.20 -fur 1.20 1.20 1.20 \