From: hackbard Date: Sun, 13 Sep 2009 11:43:44 +0000 (+0200) Subject: pc script X-Git-Url: https://hackdaworld.org/gitweb/?a=commitdiff_plain;h=0303d9fd61646d0e0c208fd2199e662694289989;p=physik%2Fposic.git pc script --- diff --git a/vasp_tools/pc_script b/vasp_tools/pc_script new file mode 100755 index 0000000..59bd85f --- /dev/null +++ b/vasp_tools/pc_script @@ -0,0 +1,39 @@ +#!/bin/bash + +if [ ! -d $1 ]; then + echo "not a valid directory ..." + exit +fi + +if [ ! -f $1/OUTCAR ]; then + echo "no vasp data found in $1 ..." + exit +fi + +if [ ! -d $1/video ]; then + echo "no video directory found ..." + echo "forgot to run outcar2moldyn?" + exit +fi + +echo +echo "WARNING !!!!" +echo "-> reading in sx sy and sz is not correct ..." +echo "WARNING !!!!" +echo + +line=`sed -n -e '/length of/,/FORCES/p' $1/OUTCAR | grep ^\ \ \ | tail -1` + +sx=`echo $line | awk '{ print $1 }'` +sy=`echo $line | awk '{ print $2 }'` +sz=`echo $line | awk '{ print $3 }'` + +file=`ls $1/video/atomic_conf*.xyz | tail -1` + +echo "running on $file using $sx $sy $sz ..." + +./pc_calc $file $sx $sy $sz | grep ^pc | \ + awk '{ print $2 " " $3 " " $4 " "$5 }' > pc.txt + +echo "done" +