CC = gcc-4.3
#CC = gcc-3.4

CFLAGS = -Wall -Winline
#CFLAGS += -Wextra -pedantic

CFLAGS += -O3 -march=native -msse2 -mfpmath=sse
#CFLAGS += -O3 -march=athlon64

CFLAGS += -g
#CFLAGS += -pg
#CFLAGS += -ffloat-store

#CFLAGS += -DPARALLEL -fopenmp
#CFLAGS += -DPTHREADS -lpthread
#CFLAGS += -DVISUAL_THREAD -lpthread
#CFLAGS += -DPTHREADS -DVISUAL_THREAD -lpthread

#CFLAGS += -DALBE
CFLAGS += -DALBE_FAST
#CFLAGS += -DTERSOFF_ORIG

#CFLAGS += -DSTATIC_LISTS
CFLAGS += -DLOWMEM_LISTS

#CFLAGS += -DPDEBUG
#CFLAGS += -DDEBUG
#CFLAGS += -DDSTART=50 -DDEND=60 -DDATOM=0
#CFLAGS += -DVDEBUG

#CFLAGS += -DQUENCH

LDFLAGS = -lm

#LDFLAGS += -lc_p
#LDFLAGS += -lefence

DEPS = moldyn.o random/random.o list/list.o
DEPS += potentials/lennard_jones.o potentials/harmonic_oscillator.o
DEPS += potentials/tersoff.o potentials/albe.o
DEPS += potentials/albe_fast.o

SRC = moldyn.c random/random.c list/list.c
SRC += potentials/lennard_jones.c potentials/harmonic_oscillator.c
SRC += potentials/tersoff.c potentials/albe.c
SRC += potentials/albe_fast.c

#ALL = mdrun sic fluctuation_calc postproc pair_correlation_calc diffusion_calc
ALL = mdrun fluctuation_calc postproc pair_correlation_calc diffusion_calc
ALL += diffusion_calc_ver2 bond_analyze search_bonds visual_atoms
ALL += display_atom_data atom_match msd_calc s2xyz

all: $(ALL)

# main code. using SRC, much more efficient code is produced!
mdrun: $(SRC)
#mdrun: $(DEPS)

sic: $(DEPS) config.h

postproc: $(DEPS)

pair_correlation_calc: $(DEPS)

diffusion_calc: $(DEPS)

diffusion_calc_ver2: $(DEPS)

bond_analyze: $(DEPS)

search_bonds: $(DEPS)

visual_atoms: $(DEPS)

display_atom_data: $(DEPS)

atom_match: $(DEPS)

msd_calc: $(DEPS)

s2xyz: $(DEPS)

.PHONY:clean
clean:
	rm -vf $(ALL) *.o */*.o