#!/bin/bash if [ ! -d $1 ]; then echo "not a valid directory ..." exit fi if [ ! -f $1/OUTCAR ]; then echo "no vasp data found in $1 ..." exit fi if [ ! -d $1/video ]; then echo "no video directory found ..." echo "forgot to run outcar2moldyn?" exit fi echo echo "WARNING !!!!" echo "-> reading in sx sy and sz is not correct ..." echo "WARNING !!!!" echo line=`sed -n -e '/length of/,/FORCES/p' $1/OUTCAR | grep ^\ \ \ | tail -1` sx=`echo $line | awk '{ print $1 }'` sy=`echo $line | awk '{ print $2 }'` sz=`echo $line | awk '{ print $3 }'` file=`ls $1/video/atomic_conf*.xyz | tail -1` echo "running on $file using $sx $sy $sz ..." ./pc_calc $file $sx $sy $sz | grep ^pc | \ awk '{ print $2 " " $3 " " $4 " "$5 }' > pc.txt echo "done"